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Home >> BLAST
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Extract SSR
BLAST
Statistics
Online Tools
NCBI
GeneDB
Sanger Institute
Primer3
Sequence Anlysis at EBI
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Basic Local Alignment Search Tool (BLAST)
[?] Help
Choose a BLAST type :
Gapped Blast
UnGapped
BLASTn
Sequence Input :
Paste Sequences:(in Plain Format)
Example Sequence
Database Selection :
Exclude species:
-----Non-----
Leishmania major
Leishmania infantum
Leishmania donovani
Leishmania torentolae
Leishmania maxicana
Leishmania braziliensis
Plasmodium falciparum
Trypanosoma brucei
Theileria annulata
Theileria parva
Parameters :
Expected Threshold Value(E-value):
Word Size :
2
3
4
9
12
16
26
Final X-drop Value :
DUST filter :
No
Yes
Match/Mismatch Scoring Scheme :
1,-2
1,-1
1,-3
2,-3
2,-6
Gap cost :
Existance : 5 Extension: 2
Existance :2 Extension:2
Existance :1 Extension:2
Existance :0 Extension:2
Existance :3 Extension:2
Existance :2 Extension:1
Existance :1 Extension:1
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